PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr10P19180_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 198aa    MW: 21979.9 Da    PI: 7.6711
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr10P19180_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.82e-13250455
                            HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                     HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                            +h ++Er+RR+++N+ ++ Lr+l+P++     ++ + a+i+  A++Y+k+L+
  GSMUA_Achr10P19180_001  2 THIAVERNRRRQMNEYLAVLRSLMPSS---FVQRGDQASIVGGAINYVKELE 50
                            8*************************9...9******************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.40E-11154No hitNo description
PROSITE profilePS5088815.015149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.75E-15164IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.5E-13252IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-10250IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-11455IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
MTHIAVERNR RRQMNEYLAV LRSLMPSSFV QRGDQASIVG GAINYVKELE QLLRSLELRK  60
RLEQRAANGG ATDSSSSSSS SNNDKKNHGV TGADTAFGNS GEVENRAATA NIEVTVVESH  120
ASLKVLSRRR PKQLVKLVVG LQSLRLMPLH LNVTSLDQMV LYAFSLKVED DCQHTSVDEI  180
ATAVHQMLCR IEEEETYL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009380224.11e-132PREDICTED: transcription factor bHLH94-like isoform X2
SwissprotQ9C7T42e-64BH096_ARATH; Transcription factor bHLH96
TrEMBLM0RJJ31e-144M0RJJ3_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr10P19180_0011e-144(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP74138156
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.14e-56bHLH family protein